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PDBsum entry 3ask
Go to PDB code:
Ligand/metal interactions
PDB id
3ask
Ligand highlighted
ALA-ARG-THR-LYS-
GLN-THR-ALA-ARG-
M3L
Ligands
ALA-ARG-THR-LYS-
GLN-THR-ALA-ARG-
M3L-SER
ALA 1(P) to SER 10(P)
ALA-ARG-THR-LYS-
GLN-THR-ALA-ARG-
M3L
ALA 1(Q) to M3L 9(Q)
M3L
M3L 9(R)
Metals
_ZN
×7
ZN 503(A)
ZN 501(C)
ZN 501(A)
ZN 502(A)
Ligand
ALA-ARG-THR-LYS-GLN-THR-ALA-ARG-M3L
-
N-Trimethyllysine
Formula:
C
9
H
21
N
2
O
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ALA 1(Q)
6
-
-
-
-
-
-
-
-
-
ARG 2(Q)
12
12
1
1
0
0
0
0
0
0
THR 3(Q)
8
8
1
1
0
0
0
0
0
0
LYS 4(Q)
10
10
1
1
0
0
0
0
0
0
GLN 5(Q)
10
10
1
1
0
0
0
0
0
0
THR 6(Q)
8
8
1
1
0
0
0
0
0
0
ALA 7(Q)
6
-
-
-
-
-
-
-
-
-
ARG 8(Q)
12
12
1
1
0
0
0
0
0
0
M3L 9(Q)
13
12
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
ALA 1(Q)
-
0
ARG 2(Q)
-
0
THR 3(Q)
-
0
LYS 4(Q)
O: OXT
1
GLN 5(Q)
-
0
THR 6(Q)
O: OXT
1
ALA 7(Q)
-
0
ARG 8(Q)
O: OXT
1
M3L 9(Q)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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of interactions involving ligand ALA-ARG-THR-LYS-GLN-THR-ALA-ARG-M3L
List of
interactions
ALA 1(Q) to M3L 9(Q)
_ZN
×7
