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PDBsum entry 2peh
Go to PDB code:
Ligand/metal interactions
PDB id
2peh
Ligand highlighted
ARG-LYS-SER-ARG-
TRP-ASP-GLU-THR-
PRO
Ligands
LYS-ARG-LYS-SER-
ARG-TRP-ASP-GLU-
THR-PRO
LYS 333(C) to PRO 342(C)
ARG-LYS-SER-ARG-
TRP-ASP-GLU-THR-
PRO
ARG 334(D) to PRO 342(D)
Ligand
ARG-LYS-SER-ARG-TRP-ASP-GLU-THR-PRO
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ARG 334(D)
12
6
1
1
6
0
-
-
-
-
LYS 335(D)
10
6
1
1
4
0
-
-
-
-
SER 336(D)
7
6
0
0
1
0
-
-
-
-
ARG 337(D)
12
12
1
1
0
0
0
0
0
0
TRP 338(D)
15
15
1
1
0
0
0
0
0
0
ASP 339(D)
9
9
1
1
0
0
0
0
0
0
GLU 340(D)
10
10
1
1
0
0
0
0
0
0
THR 341(D)
8
6
1
1
2
0
-
-
-
-
PRO 342(D)
8
7
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
ARG 334(D)
-
0
LYS 335(D)
-
0
SER 336(D)
CB: C
|
C: CB
|
O: OG
|
OG: OXT
4
ARG 337(D)
O: OXT
1
TRP 338(D)
O: OXT
1
ASP 339(D)
OD2: OD1
|
OD1: OD2
2
GLU 340(D)
OE2: OE1
|
OE1: OE2
2
THR 341(D)
CB: C
|
C: CB
|
O: OG1
3
PRO 342(D)
-
0
Additional Information
Validation carried out using
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Validator
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3D Viewers:
LIGPLOT
of interactions involving ligand ARG-LYS-SER-ARG-TRP-ASP-GLU-THR-PRO
List of
interactions
ARG 334(D) to PRO 342(D)
