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PDBsum entry 1jvq
Go to PDB code:
Ligand/metal interactions
PDB id
1jvq
Ligand highlighted
TRP-MET-ASP-PHE-
NH2
Ligands
ACE-SER-GLU-ALA-
ALA-ALA-SER-THR
ACE 1(C) to THR 8(C)
TRP-MET-ASP-PHE-
NH2
TRP 9(D) to NH2 13(D)
NDG
×7
NDG 801(L)
NDG 841(L)
NDG 842(L)
NDG 861(L)
NAG
×2
NAG 841(I)
NAG 861(I)
Ligand
TRP-MET-ASP-PHE-NH2
-
Amino group
Formula:
H
2
N
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
TRP 9(D)
15
15
1
1
Complete
Chiral checks - OK
MET 10(D)
9
9
1
1
Complete
Chiral checks - OK
ASP 11(D)
9
9
1
1
Complete
Chiral checks - OK
PHE 12(D)
12
12
1
1
Complete
Chiral checks - OK
NH2 13(D)
1
-
-
-
Residue too small to validate
Advanced Analysis
Residue
Name Mismatches
Count
TRP 9(D)
-
0
MET 10(D)
O: OXT
1
ASP 11(D)
-
0
PHE 12(D)
O: OXT
1
NH2 13(D)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand TRP-MET-ASP-PHE-NH2
List of
interactions
TRP 9(D) to NH2 13(D)
