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PDBsum entry 1cvu
Go to PDB code:
Ligand/metal interactions
PDB id
1cvu
2 instances of ligand highlighted
NAG-NAG
Ligands
THR-LYS-THR-ALA-
THR-ILE-ASN-ALA-
SER
THR 2595(F) to SER 2603(F)
NAG-NAG
×2
NAG 1(C) to NAG 2(C)
NAG 1(E) to NAG 2(E)
NAG-NAG-MAN-MAN
×2
NAG 1(D) to MAN 4(D)
NAG 1(G) to MAN 4(G)
NAG
×2
NAG 681(A)
NAG 2681(B)
BOG
×5
BOG 702(A)
BOG 703(A)
BOG 704(A)
BOG 2702(B)
BOG 2704(B)
ACD
×2
ACD 701(A)
ACD 2701(B)
Ligand
NAG-NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(C)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(C)
15
15
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG
List of
interactions
NAG 1(C) to NAG 2(C)
