Figure 3.
Figure 3. Alignment of the designed protein sequences M1
through M8 with TOP 7 (Kuhlman et al., 2003). Residues identical
to the sequence of TOP 7 are shaded in dark gray. Predefined
residues appear in black. Target conformational regions for the
[2]/
[3]
pairs are indicated above the respective second amino acids of
each tetrapeptide section. h: helix/ -turn,
e: -sheet/extended,
l: left-handed helix, and x: II -turn.
[2]/
[3]
pairs are indicated above the respective second amino acids of
each tetrapeptide section. h: helix/ 
-turn,
e: 
-sheet/extended,
l: left-handed helix, and x: II