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PDBsum entry 7agd
Go to PDB code:
Ligand/metal interactions
PDB id
7agd
4 instances of ligand highlighted
BOC-VAL-VAL-PSA-
ALA-PSA
Ligands
BOC-VAL-VAL-PSA-
ALA-PSA
×4
BOC 1(I) to PSA 6(I)
1PE
×2
1PE 401(A)
1PE 403(D)
PEG
PEG 402(A)
PGE
×3
PGE 401(B)
PGE 401(C)
PGE 402(D)
MES
MES 402(B)
FOR
FOR 101(J)
Metals
_NA
NA 401(D)
Ligand
BOC-VAL-VAL-PSA-ALA-PSA
BOC
-
Tert-Butyl hydrogen carbonate
Formula:
C
5
H
10
O
3
PSA
-
3-Hydroxy-4-Amino-5-Phenylpentanoic acid
Formula:
C
11
H
5
NO
3
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
BOC 1(I)
8
8
1
1
0
0
0
0
0
0
VAL 2(I)
8
8
1
1
0
0
0
0
0
0
VAL 3(I)
8
8
1
1
0
0
0
0
0
0
PSA 4(I)
15
15
1
1
0
0
0
0
0
0
ALA 5(I)
6
-
-
-
-
-
-
-
-
-
PSA 6(I)
15
14
0
0
1
0
-
-
-
-
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand BOC-VAL-VAL-PSA-ALA-PSA
List of
interactions
BOC 1(I) to PSA 6(I)
also representing 3 other equivalent ligands:
BOC 1(J) to PSA 6(J)
BOC 1(K) to PSA 6(K)
BOC 1(L) to PSA 6(L)
_NA
