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PDBsum entry 6txc
Go to PDB code:
Ligand/metal interactions
PDB id
6txc
16 instances of ligand highlighted
0KX
Ligands
0KX
×16
0KX 705(A)
GTP
×16
GTP 706(A)
GTP 705(E)
GTP 705(F)
GTP 707(G)
GTP 706(I)
GTP 705(J)
GTP 707(K)
GTP 707(L)
GTP 706(M)
GTP 705(N)
GTP 706(O)
GTP 707(O)
SO4
×9
SO4 707(A)
DTP
×16
DTP 708(A)
DTP 708(B)
DTP 706(E)
DTP 706(F)
DTP 708(I)
DTP 707(J)
DTP 708(M)
DTP 706(N)
Metals
_FE
×16
FE 701(A)
_MG
×42
MG 702(A)
MG 703(A)
MG 704(A)
MG 703(E)
MG 703(F)
MG 705(G)
MG 704(H)
MG 704(I)
MG 703(J)
MG 705(K)
MG 705(L)
MG 704(M)
MG 703(N)
MG 704(O)
Ligand
0KX
-
2'-Deoxy-5'-O-[(R)-Hydroxy{[(r)-
Hydroxy(phosphonooxy) phosphoryl]amino}phosphoryl]cytidine
Formula:
C
9
H
17
N
4
O
12
P
3
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
0KX 705(A)
28
28
0
0
0
0
0
1
0
0
Advanced Analysis
Residue
Name Mismatches
Count
0KX 705(A)
O2B: O1B
|
O1B: O2B
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand 0KX
List of
interactions
0KX 705(A)
also representing 15 other equivalent ligands:
0KX 705(B)
0KX 706(C)
0KX 706(D)
0KX 704(E)
0KX 704(F)
0KX 706(G)
0KX 705(H)
0KX 705(I)
0KX 704(J)
0KX 706(K)
0KX 706(L)
0KX 705(M)
0KX 704(N)
0KX 705(O)
0KX 706(P)
_FE
×16
_MG
×42
