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PDBsum entry 6pdp
Go to PDB code:
Ligand/metal interactions
PDB id
6pdp
Ligand highlighted
LYS-ARG-ARG-ARG-
HIS-PRO-SER
Ligands
LYS-ARG-ARG-ARG-
HIS-PRO-SER
LYS 3(B) to SER 9(B)
SO4
SO4 501(A)
OBY
OBY 502(A)
Ligand
LYS-ARG-ARG-ARG-HIS-PRO-SER
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
LYS 3(B)
10
6
1
1
4
0
-
-
-
-
ARG 4(B)
12
12
1
1
0
0
0
0
0
0
ARG 5(B)
12
12
1
1
0
0
0
0
0
0
ARG 6(B)
12
12
1
1
0
0
0
0
0
0
HIS 7(B)
11
11
1
1
0
0
0
0
0
0
PRO 8(B)
8
8
1
1
0
0
0
0
0
0
SER 9(B)
7
6
0
0
1
0
-
-
-
-
Additional Information
Validation carried out using
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3D Viewers:
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of interactions involving ligand LYS-ARG-ARG-ARG-HIS-PRO-SER
List of
interactions
LYS 3(B) to SER 9(B)
