Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
PDBsum entry 6en3
Go to PDB code:
Ligand/metal interactions
PDB id
6en3
Ligand highlighted
NAG-BMA-MAN-NAG-
GAL-MAN-NAG-GAL
Ligands
NAG-BMA-MAN-NAG-
GAL-MAN-NAG-GAL
NAG 1(B) to GAL 8(B)
Metals
_NI
NI 1302(A)
_CA
CA 1301(A)
Ligand
NAG-BMA-MAN-NAG-GAL-MAN-NAG-GAL
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
BMA
-
Beta-D-Mannopyranose [Beta-D-Mannose; d-Mannose; mannose]
Formula:
C
6
H
12
O
6
MAN
-
Alpha-D-Mannopyranose [Alpha-D-Mannose; d-Mannose; mannose]
Formula:
C
6
H
12
O
6
GAL
-
Beta-D-Galactopyranose [Beta-D-Galactose; d-Galactose; galactose]
Formula:
C
6
H
12
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(B)
15
15
0
0
Complete
Chiral checks - OK
BMA 2(B)
12
12
1
0
Complete
Chiral checks - OK
MAN 3(B)
12
12
1
0
Complete
Chiral checks - OK
NAG 4(B)
15
15
1
0
Complete
Chiral checks - OK
GAL 5(B)
12
12
1
0
Complete
Chiral checks - OK
MAN 6(B)
12
12
1
0
Complete
Chiral checks - OK
NAG 7(B)
15
15
1
0
Complete
Chiral checks - OK
GAL 8(B)
12
12
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
Use mouse to move/zoom
3D Viewers:
LIGPLOT
of interactions involving ligand NAG-BMA-MAN-NAG-GAL-MAN-NAG-GAL
List of
interactions
NAG 1(B) to GAL 8(B)
_NI
_CA
