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PDBsum entry 6c4h
Go to PDB code:
Ligand/metal interactions
PDB id
6c4h
Ligand highlighted
SER-THR-ARG-ASN-
GLY-ARG-ASP-SER-
GLU-ALA
Ligands
SER-THR-ARG-ASN-
GLY-ARG-ASP-SER-
GLU-ALA
SER 9(X) to ALA 18(X)
Metals
_MG
×34
MG 3034(A)
MG 3001(A)
MG 3002(A)
MG 3003(A)
MG 3004(A)
MG 3005(A)
MG 3006(A)
MG 3007(A)
MG 3008(A)
MG 3009(A)
MG 3010(A)
MG 3011(A)
MG 3012(A)
MG 3013(A)
MG 3014(A)
MG 3015(A)
MG 3016(A)
MG 3017(A)
MG 3018(A)
MG 3019(A)
MG 3020(A)
MG 3021(A)
MG 3022(A)
MG 3023(A)
MG 3024(A)
MG 3025(A)
MG 3026(A)
MG 3027(A)
MG 3028(A)
MG 3029(A)
MG 3030(A)
MG 3031(A)
MG 3032(A)
MG 3033(A)
Ligand
SER-THR-ARG-ASN-GLY-ARG-ASP-SER-GLU-ALA
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
SER 9(X)
7
6
0
0
1
0
-
-
-
-
THR 10(X)
8
8
1
1
0
0
0
0
0
0
ARG 11(X)
12
12
1
1
0
0
0
0
0
0
ASN 12(X)
9
9
1
1
0
0
0
0
0
0
GLY 13(X)
5
-
-
-
-
-
-
-
-
-
ARG 14(X)
12
12
1
1
0
0
0
0
0
0
ASP 15(X)
9
9
1
1
0
0
0
0
0
0
SER 16(X)
7
6
0
0
1
0
-
-
-
-
GLU 17(X)
10
10
1
1
0
0
0
0
0
0
ALA 18(X)
6
-
-
-
-
-
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
SER 9(X)
CB: C
|
C: CB
|
O: OG
|
OG: OXT
4
THR 10(X)
-
0
ARG 11(X)
O: OXT
1
ASN 12(X)
-
0
GLY 13(X)
-
0
ARG 14(X)
-
0
ASP 15(X)
OD2: OD1
|
OD1: OD2
|
O: OXT
3
SER 16(X)
CB: C
|
C: CB
|
O: OG
|
OG: OXT
4
GLU 17(X)
-
0
ALA 18(X)
-
0
Additional Information
Validation carried out using
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of interactions involving ligand SER-THR-ARG-ASN-GLY-ARG-ASP-SER-GLU-ALA
List of
interactions
SER 9(X) to ALA 18(X)
_MG
×34
