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PDBsum entry 5kn0
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Ligand/metal interactions
PDB id
5kn0
Ligand highlighted
NAG-NAG
Ligands
NAG-NAG
NAG 1(E) to NAG 2(E)
NAG-NAG-BMA
NAG 1(F) to BMA 3(F)
NAG
×2
NAG 501(A)
MPD
×10
MPD 507(A)
MPD 508(A)
MPD 509(B)
MPD 507(C)
MPD 509(C)
Metals
_CA
×19
CA 502(A)
CA 503(A)
CA 504(A)
CA 505(A)
CA 506(A)
Ligand
NAG-NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(E)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(E)
15
15
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG
List of
interactions
NAG 1(E) to NAG 2(E)
_CA
×19
