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PDBsum entry 5ivg
Go to PDB code:
Ligand/metal interactions
PDB id
5ivg
4 instances of ligand highlighted
FPS
Ligands
FPS
×4
FPS 704(A)
GOL
×3
GOL 705(A)
GOL 705(B)
GOL 705(C)
Metals
_MG
×12
MG 701(A)
MG 702(A)
MG 703(A)
Ligand
FPS
-
S-[(2e,6e)-3,7,11-Trimethyldodeca-2,6,10-
Trienyl] trihydrogen thiodiphosphate
[Farnesyl thiopyrophosphate]
Formula:
C
15
H
28
O
6
P
2
S
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
FPS 704(A)
24
24
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
FPS 704(A)
O2A: O1A
|
O1A: O2A
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand matches this enzyme's product (+)-aristolochene with similarity 56.00%
LIGPLOT
of interactions involving ligand FPS
List of
interactions
FPS 704(A)
also representing 3 other equivalent ligands:
FPS 704(B)
FPS 704(C)
FPS 704(D)
_MG
×12
