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PDBsum entry 5hkk
Go to PDB code:
Ligand/metal interactions
PDB id
5hkk
12 instances of ligand highlighted
ADP
Ligands
ADP
×12
ADP 601(A)
ADP 600(D)
GOL
GOL 603(A)
PO4
×2
PO4 502(E)
PO4 502(M)
ATP
×2
ATP 201(H)
Metals
_MG
×12
MG 601(B)
MG 601(C)
MG 601(D)
MG 601(G)
MG 601(I)
MG 601(J)
MG 601(K)
Ligand
ADP
-
Adenosine-5'-Diphosphate
Formula:
C
10
H
15
N
5
O
10
P
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ADP 601(A)
27
27
0
0
0
0
0
1
0
0
Advanced Analysis
Residue
Name Mismatches
Count
ADP 601(A)
O2B: O1B
|
O1B: O3B
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand corresponds to this enzyme's product ADP
LIGPLOT
of interactions involving ligand ADP
List of
interactions
ADP 601(A)
also representing 5 other equivalent ligands:
ADP 600(B)
ADP 600(C)
ADP 600(I)
ADP 600(J)
ADP 600(K)
_MG
×12
