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PDBsum entry 5gmf
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Top Page protein dna_rna ligands metals Protein-protein interface(s) links
Ligand/metal interactions PDB id
5gmf
6 instances of ligand highlighted
NAG-NAG
Ligands
NAG-NAG ×6
NAG 1(I) to NAG 2(I)
NAG 1(J) to NAG 2(J)
NAG ×18
NAG 902(A)
NAG 907(A)
NAG 908(A)
NAG 910(B)
NAG 906(C)
NAG 907(C)
NAG 910(C)
NAG 908(D)
NAG 909(D)
GMP ×4
GMP 901(B)
GMP 901(C)
GMP 901(D)
Metals
_CA ×4
CA 901(A)
CA 903(D)
  
Ligand NAG-NAG - 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula: C8H15NO6
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
NAG 1(I) 15 15 1 1 Complete Chiral checks - OK
NAG 2(I) 15 15 1 0 Complete Chiral checks - OK
Additional Information
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LIGPLOT of interactions involving ligand NAG-NAG

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List of
interactions
 

NAG 1(I) to NAG 2(I)

(also representing equivalent ligand NAG 1(K) to NAG 2(K) )
  
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