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PDBsum entry 5fo8
Go to PDB code:
Ligand/metal interactions
PDB id
5fo8
Ligand highlighted
NAG-NAG
Ligands
NAG-NAG
NAG 1(D) to NAG 2(D)
NAG-NAG-BMA
NAG 1(E) to BMA 3(E)
EDO
×32
EDO 1666(A)
EDO 1667(A)
EDO 1668(A)
EDO 1669(A)
EDO 2664(B)
EDO 2665(B)
EDO 2666(B)
EDO 2667(B)
EDO 2668(B)
EDO 2669(B)
EDO 2670(B)
EDO 2671(B)
EDO 2672(B)
EDO 2673(B)
EDO 2674(B)
EDO 2675(B)
EDO 2676(B)
EDO 2677(B)
EDO 2678(B)
EDO 2679(B)
EDO 2680(B)
EDO 2681(B)
EDO 2682(B)
EDO 2683(B)
EDO 2684(B)
EDO 2685(B)
EDO 2686(B)
EDO 2687(B)
EDO 2688(B)
EDO 2689(B)
EDO 2690(B)
EDO 2691(B)
Ligand
NAG-NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(D)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(D)
15
15
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG
List of
interactions
NAG 1(D) to NAG 2(D)
