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PDBsum entry 5c13
Go to PDB code:
Ligand/metal interactions
PDB id
5c13
4 instances of ligand highlighted
ALA-ARG-THR-4WQ-
GLN-THR
Ligands
ALA-ARG-THR-4WQ-
GLN-THR
×4
ALA 1(P) to THR 6(P)
Metals
_ZN
×8
ZN 1002(A)
ZN 1001(A)
Ligand
ALA-ARG-THR-4WQ-GLN-THR
-
(2s)-2-Amino-7,7-Dimethyloctanoic acid
Formula:
C
10
HNO
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ALA 1(P)
6
-
-
-
-
-
-
-
-
-
ARG 2(P)
12
12
1
1
0
0
0
0
0
0
THR 3(P)
8
8
1
1
0
0
0
0
0
0
4WQ 4(P)
13
13
1
1
0
0
0
0
0
0
GLN 5(P)
10
10
1
1
0
0
0
0
0
0
THR 6(P)
8
7
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
ALA 1(P)
-
0
ARG 2(P)
-
0
THR 3(P)
-
0
4WQ 4(P)
-
0
GLN 5(P)
-
0
THR 6(P)
O: OXT
1
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand ALA-ARG-THR-4WQ-GLN-THR
List of
interactions
ALA 1(P) to THR 6(P)
also representing 3 other equivalent ligands:
ALA 1(D) to THR 6(D)
ALA 1(F) to THR 6(F)
ALA 1(H) to THR 6(H)
_ZN
×8
