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PDBsum entry 4zro
Go to PDB code:
Ligand/metal interactions
PDB id
4zro
4 instances of ligand highlighted
BOC-SER-VAL-LEU-
CEV
Ligands
BOC-SER-VAL-LEU-
CEV
×4
BOC 1(E) to CEV 5(E)
DMS
×2
DMS 301(A)
DMS 301(B)
Ligand
BOC-SER-VAL-LEU-CEV
BOC
-
Tert-Butyl hydrogen carbonate
Formula:
C
5
H
10
O
3
CEV
-
Ethyl (4r)-4-Amino-5-[(3s)-2-Oxopyrrolidin-3- Yl]pentanoate
Formula:
C
11
H
20
N
2
O
3
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
BOC 1(E)
8
8
1
1
Complete
Chiral checks - OK
SER 2(E)
7
7
1
1
Complete
Chiral checks - OK
VAL 3(E)
8
8
1
1
Complete
Chiral checks - OK
LEU 4(E)
9
9
1
1
Complete
Chiral checks - OK
CEV 5(E)
16
16
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
BOC 1(E)
-
0
SER 2(E)
-
0
VAL 3(E)
-
0
LEU 4(E)
O: OXT
1
CEV 5(E)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand BOC-SER-VAL-LEU-CEV
List of
interactions
BOC 1(E) to CEV 5(E)
also representing 3 other equivalent ligands:
BOC 1(F) to CEV 5(F)
BOC 1(G) to CEV 5(G)
BOC 1(H) to CEV 5(H)
