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PDBsum entry 4ylq
Go to PDB code:
Ligand/metal interactions
PDB id
4ylq
Ligand highlighted
BGC-XYS-XYS
Ligands
BGC-XYS-XYS
BGC 1(A) to XYS 3(A)
FUC
FUC 212(L)
TMA
×22
TMA 213(L)
TMA 503(H)
TMA 504(H)
TMA 505(H)
TMA 506(H)
TMA 507(H)
TMA 508(H)
TMA 510(H)
TMA 511(H)
TMA 512(H)
TMA 301(T)
TMA 302(T)
TMA 303(T)
TMA 304(T)
TMA 305(T)
TMA 306(T)
TMA 307(T)
TMA 308(T)
TMA 309(T)
TMA 310(T)
TMA 311(T)
TMA 312(T)
0Z7
0Z7 501(H)
POL
POL 509(H)
Metals
_CA
×9
CA 201(L)
CA 202(L)
CA 203(L)
CA 204(L)
CA 205(L)
CA 206(L)
CA 207(L)
CA 208(L)
CA 502(H)
Ligand
BGC-XYS-XYS
BGC
-
Beta-D-Glucopyranose [Beta-D-Glucose; d-Glucose; glucose]
Formula:
C
6
H
12
O
6
XYS
-
Alpha-D-Xylopyranose [Alpha-D-Xylose; d-Xylose; xylose; xylopyranose]
Formula:
C
5
H
10
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
BGC 1(A)
12
12
1
0
Complete
Chiral checks - OK
XYS 2(A)
10
10
1
0
Complete
Chiral checks - OK
XYS 3(A)
10
10
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand BGC-XYS-XYS
List of
interactions
BGC 1(A) to XYS 3(A)
_CA
×9
