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PDBsum entry 4xi9
Go to PDB code:
Ligand/metal interactions
PDB id
4xi9
4 instances of ligand highlighted
VAL-THR-PRO-VAL-
SER-THR-ALA-ALA
Ligands
VAL-THR-PRO-VAL-
SER-THR-ALA-ALA
×4
VAL 1416(E) to ALA 1423(E)
12V
×4
12V 1200(A)
Ligand
VAL-THR-PRO-VAL-SER-THR-ALA-ALA
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
VAL 1416(E)
8
8
1
1
0
0
0
0
0
0
THR 1417(E)
8
8
1
1
0
0
0
0
0
0
PRO 1418(E)
8
8
1
1
0
0
0
0
0
0
VAL 1419(E)
8
8
1
1
0
0
0
0
0
0
SER 1420(E)
7
6
0
0
1
0
-
-
-
-
THR 1421(E)
8
8
1
1
0
0
0
0
0
0
ALA 1422(E)
6
-
-
-
-
-
-
-
-
-
ALA 1423(E)
6
-
-
-
-
-
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
VAL 1416(E)
-
0
THR 1417(E)
-
0
PRO 1418(E)
-
0
VAL 1419(E)
-
0
SER 1420(E)
CB: C
|
C: CB
|
O: OG
|
OG: OXT
4
THR 1421(E)
-
0
ALA 1422(E)
-
0
ALA 1423(E)
-
0
Additional Information
Validation carried out using
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3D Viewers:
LIGPLOT
of interactions involving ligand VAL-THR-PRO-VAL-SER-THR-ALA-ALA
List of
interactions
VAL 1416(E) to ALA 1423(E)
also representing 3 other equivalent ligands:
VAL 1416(F) to ALA 1423(F)
VAL 1416(G) to ALA 1423(G)
VAL 1416(H) to ALA 1423(H)
