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PDBsum entry 4pgz
Go to PDB code:
Ligand/metal interactions
PDB id
4pgz
3 instances of ligand highlighted
NAG
Ligands
NAG
×3
NAG 601(C)
NAG 601(A)
Metals
_CO
×5
CO 603(C)
CO 604(A)
CO 602(C)
CO 602(A)
CO 603(A)
Ligand
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 601(C)
15
15
1
1
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand matches this enzyme's product ADP with similarity 41.38%
LIGPLOT
of interactions involving ligand NAG
List of
interactions
NAG 601(C)
_CO
×5
