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PDBsum entry 4nxq
Go to PDB code:
Ligand/metal interactions
PDB id
4nxq
Ligand highlighted
ASN-GLN-LYS-GLU-
TYR-PHE-PHE
Ligands
ASN-GLN-LYS-GLU-
TYR-PHE-PHE
ASN 2(D) to PHE 8(D)
GLN-LYS-GLU-TYR-
PHE-PHE
×2
GLN 3(E) to PHE 8(E)
GLN 3(F) to PHE 8(F)
Ligand
ASN-GLN-LYS-GLU-TYR-PHE-PHE
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ASN 2(D)
9
9
1
1
Complete
Chiral checks - OK
GLN 3(D)
10
10
1
1
Complete
Chiral checks - OK
LYS 4(D)
10
10
1
1
Complete
Chiral checks - OK
GLU 5(D)
10
10
1
1
Complete
Chiral checks - OK
TYR 6(D)
13
13
1
1
Complete
Chiral checks - OK
PHE 7(D)
12
12
1
1
Complete
Chiral checks - OK
PHE 8(D)
12
12
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
ASN 2(D)
-
0
GLN 3(D)
-
0
LYS 4(D)
-
0
GLU 5(D)
OE2: OE1
|
OE1: OE2
2
TYR 6(D)
O: OXT
1
PHE 7(D)
O: OXT
1
PHE 8(D)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
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3D Viewers:
LIGPLOT
of interactions involving ligand ASN-GLN-LYS-GLU-TYR-PHE-PHE
List of
interactions
ASN 2(D) to PHE 8(D)
