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PDBsum entry 4mnv
Go to PDB code:
Ligand/metal interactions
PDB id
4mnv
Ligand highlighted
THR-CYS-ARG-GLN-
SER-MET-CYS-THR-
ALA-ARG
Ligands
THR-CYS-ARG-GLN-
SER-MET-CYS-THR-
ALA-ARG
THR 1(B) to ARG 10(B)
THR-CYS-PRO-NH2
THR 11(C) to NH2 14(C)
SO4
SO4 301(A)
ACT
×2
ACT 302(A)
ACT 303(A)
ZBR
ZBR 101(B)
GOL
GOL 101(C)
Ligand
THR-CYS-ARG-GLN-SER-MET-CYS-THR-ALA-ARG
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
THR 1(B)
8
8
1
1
Complete
Chiral checks - OK
CYS 2(B)
7
7
1
1
Complete
Chiral checks - OK
ARG 3(B)
12
12
1
1
Complete
Chiral checks - OK
GLN 4(B)
10
10
1
1
Complete
Chiral checks - OK
SER 5(B)
7
7
1
1
Complete
Chiral checks - OK
MET 6(B)
9
9
1
1
Complete
Chiral checks - OK
CYS 7(B)
7
7
1
1
Complete
Chiral checks - OK
THR 8(B)
8
8
1
1
Complete
Chiral checks - OK
ALA 9(B)
6
-
-
-
Residue too small to validate
ARG 10(B)
12
12
1
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
THR 1(B)
-
0
CYS 2(B)
-
0
ARG 3(B)
-
0
GLN 4(B)
O: OXT
1
SER 5(B)
O: OXT
1
MET 6(B)
-
0
CYS 7(B)
O: OXT
1
THR 8(B)
-
0
ALA 9(B)
-
0
ARG 10(B)
O: OXT
1
Additional Information
Validation carried out using
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LIGPLOT
of interactions involving ligand THR-CYS-ARG-GLN-SER-MET-CYS-THR-ALA-ARG
List of
interactions
THR 1(B) to ARG 10(B)
