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PDBsum entry 4jor
Go to PDB code:
Ligand/metal interactions
PDB id
4jor
Ligand highlighted
ARG-LEU-GLN-ARG-
ARG-ARG-GLU-THR-
GLN-VAL
Ligands
ARG-LEU-GLN-ARG-
ARG-ARG-GLU-THR-
GLN-VAL
ARG 1(C) to VAL 10(C)
ARG-GLU-THR-GLN-
VAL
ARG 6(D) to VAL 10(D)
GOL
×2
GOL 401(A)
GOL 402(A)
Ligand
ARG-LEU-GLN-ARG-ARG-ARG-GLU-THR-GLN-VAL
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ARG 1(C)
12
12
1
1
Complete
Chiral checks - OK
LEU 2(C)
9
9
1
1
Complete
Chiral checks - OK
GLN 3(C)
10
10
1
1
Complete
Chiral checks - OK
ARG 4(C)
12
12
1
1
Complete
Chiral checks - OK
ARG 5(C)
12
12
1
1
Complete
Chiral checks - OK
ARG 6(C)
12
12
1
1
Complete
Chiral checks - OK
GLU 7(C)
10
10
1
1
Complete
Chiral checks - OK
THR 8(C)
8
8
1
1
Complete
Chiral checks - OK
GLN 9(C)
10
10
1
1
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
ARG 1(C)
-
0
LEU 2(C)
-
0
GLN 3(C)
-
0
ARG 4(C)
O: OXT
1
ARG 5(C)
-
0
ARG 6(C)
O: OXT
1
GLU 7(C)
OE2: OE1
|
OE1: OE2
2
THR 8(C)
-
0
GLN 9(C)
O: OXT
1
Additional Information
Validation carried out using
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of interactions involving ligand ARG-LEU-GLN-ARG-ARG-ARG-GLU-THR-GLN-VAL
List of
interactions
ARG 1(C) to VAL 10(C)
