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PDBsum entry 4gpk
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Top Page protein ligands Protein-protein interface(s) links
Ligand/metal interactions PDB id
4gpk
12 instances of ligand highlighted
SER-SER-LYS-PRO-
ASP-ILE-VAL-GLY
Ligands
SER-SER-LYS-PRO-
ASP-ILE-VAL-GLY ×12
SER 25(M) to GLY 32(M)
  
Ligand SER-SER-LYS-PRO-ASP-ILE-VAL-GLY
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
SER 25(M) 7 7 1 1 Complete Chiral checks - OK
SER 26(M) 7 7 1 1 Complete Chiral checks - OK
LYS 27(M) 10 10 1 1 Complete Chiral checks - OK
PRO 28(M) 8 8 1 1 Complete Chiral checks - OK
ASP 29(M) 9 9 1 1 Complete Chiral checks - OK
ILE 30(M) 9 9 1 1 Complete Chiral checks - OK
VAL 31(M) 8 8 1 1 Complete Chiral checks - OK
GLY 32(M) 5 - - - Residue too small to validate
Advanced Analysis
Residue Name Mismatches Count
SER 25(M) - 0
SER 26(M) - 0
LYS 27(M) - 0
PRO 28(M) - 0
ASP 29(M) - 0
ILE 30(M) O: OXT 1
VAL 31(M) - 0
GLY 32(M) - 0
Additional Information
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LIGPLOT of interactions involving ligand SER-SER-LYS-PRO-ASP-ILE-VAL-GLY

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List of
interactions
 

SER 25(M) to GLY 32(M)

also representing 11 other equivalent ligands:
SER 25(N) to GLY 32(N)
SER 25(O) to GLY 32(O)
SER 25(P) to GLY 32(P)
SER 25(Q) to GLY 32(Q)
SER 25(R) to GLY 32(R)
SER 25(S) to GLY 32(S)
SER 25(T) to GLY 32(T)
SER 25(U) to GLY 32(U)
SER 25(V) to GLY 32(V)
SER 25(W) to GLY 32(W)
SER 25(X) to GLY 32(X)
  
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