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PDBsum entry 4fzc
Go to PDB code:
Ligand/metal interactions
PDB id
4fzc
4 instances of ligand highlighted
0W5-THR-LYO-0W6
Ligands
0W5-THR-LYO-0W6
×4
0W5 1(c) to 0W6 4(c)
0W5 1(d) to 0W6 4(d)
Ligand
0W5-THR-LYO-0W6
0W5
-
(2e,4e)-11-Methyldodeca-2,4-Dienoic acid
Formula:
C
13
H
22
O
2
LYO
-
4-Hydroxy-Lysine
Formula:
C
6
HNN
2
O
3
0W6
-
(4s)-4-Aminopentanoic acid [(2e,4s)-4-Aminopent-2-Enoic acid, Bound form]
Formula:
C
5
H
11
NO
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
0W5 1(c)
15
15
1
1
Complete
Chiral checks - OK
THR 2(c)
8
8
1
1
Complete
Chiral checks - OK
LYO 3(c)
11
11
1
1
Complete
Chiral checks - OK
0W6 4(c)
8
8
1
1
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
0W5 1(c)
O1: OXT
1
THR 2(c)
-
0
LYO 3(c)
-
0
0W6 4(c)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand 0W5-THR-LYO-0W6
List of
interactions
0W5 1(c) to 0W6 4(c)
(also representing equivalent ligand 0W5 1(e) to 0W6 4(e) )
