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PDBsum entry 3gdu
Go to PDB code:
Ligand/metal interactions
PDB id
3gdu
3 instances of ligand highlighted
TYR-ARG-PHE
Ligands
TYR-ARG-PHE
×3
TYR 408(D) to PHE 410(D)
TYR 408(E) to PHE 410(E)
Ligand
TYR-ARG-PHE
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
TYR 408(D)
13
13
1
1
Complete
Chiral checks - OK
ARG 409(D)
12
12
1
1
Complete
Chiral checks - OK
PHE 410(D)
12
12
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
TYR 408(D)
O: OXT
1
ARG 409(D)
O: OXT
1
PHE 410(D)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand TYR-ARG-PHE
List of
interactions
TYR 408(D) to PHE 410(D)
(also representing equivalent ligand TYR 408(F) to PHE 410(F) )
