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PDBsum entry 3fcs
Go to PDB code:
Ligand/metal interactions
PDB id
3fcs
7 instances of ligand highlighted
NAG-NAG
Ligands
NAG-NAG
×7
NAG 1(E) to NAG 2(E)
NAG 1(H) to NAG 2(H)
NAG 1(J) to NAG 2(J)
NAG 1(K) to NAG 2(K)
NAG 1(L) to NAG 2(L)
NAG 1(M) to NAG 2(M)
NAG 1(N) to NAG 2(N)
NAG-NAG-MAN-MAN
NAG 1(F) to MAN 4(F)
NAG-NAG-MAN
NAG 1(G) to MAN 3(G)
NAG-NAG-MAN-MAN-
MAN
NAG 1(I) to MAN 5(I)
NAG
×5
NAG 3015(A)
NAG 3570(A)
NAG 3099(D)
IMD
×6
IMD 5001(A)
IMD 5001(C)
IMD 960(C)
IMD 5003(C)
IMD 5004(C)
Metals
_CA
×14
CA 2003(B)
CA 2004(A)
CA 2005(A)
CA 2006(A)
CA 2007(A)
CA 2008(A)
CA 2002(B)
CA 2002(D)
CA 2003(D)
_MG
×2
MG 2001(B)
MG 2001(D)
Ligand
NAG-NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(E)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(E)
15
15
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG
List of
interactions
NAG 1(E) to NAG 2(E)
_CA
×14
_MG
×2
