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PDBsum entry 3dzy
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Top Page protein dna_rna ligands metals Protein-protein interface(s) links
Ligand/metal interactions PDB id
3dzy
Ligand highlighted
LYS-ILE-LEU-HIS-
ARG-LEU-LEU-GLN-
ASP
Ligands
LYS-ILE-LEU-HIS-
ARG-LEU-LEU-GLN-
ASP
LYS 688(G) to ASP 696(G)
LYS-ILE-LEU-HIS-
ARG-LEU-LEU-GLN-
ASP-SER
LYS 688(E) to SER 697(E)
9CR
9CR 463(A)
BRL
BRL 478(D)
Metals
_ZN ×4
ZN 7222(A)
ZN 7122(D)
ZN 7221(A)
ZN 7121(D)
  
Ligand LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN-ASP
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
LYS 688(G) 10 10 1 1 0 0 0 0 0 0
ILE 689(G) 9 9 1 1 0 0 0 0 0 0
LEU 690(G) 9 9 1 1 0 0 0 0 0 0
HIS 691(G) 11 11 1 1 0 0 0 0 0 0
ARG 692(G) 12 12 1 1 0 0 0 0 0 0
LEU 693(G) 9 9 1 1 0 0 0 0 0 0
LEU 694(G) 9 9 1 1 0 0 0 0 0 0
GLN 695(G) 10 10 1 1 0 0 0 0 0 0
ASP 696(G) 9 8 0 0 1 0 - - - -
Advanced Analysis
Residue Name Mismatches Count
LYS 688(G) O: OXT 1
ILE 689(G) - 0
LEU 690(G) - 0
HIS 691(G) O: OXT 1
ARG 692(G) O: OXT 1
LEU 693(G) - 0
LEU 694(G) - 0
GLN 695(G) - 0
ASP 696(G) OD2: OD1|OD1: OD2 2
Additional Information
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LIGPLOT of interactions involving ligand LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN-ASP

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List of
interactions
 

LYS 688(G) to ASP 696(G)
  
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