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PDBsum entry 2z3c
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Ligand/metal interactions
PDB id
2z3c
Ligand highlighted
ACE-VAL-Z3E-LEU-
ECQ-KCQ
Ligands
ACE-VAL-Z3E-LEU-
ECQ-KCQ
ACE 307(B) to KCQ 311(B)
GOL
GOL 801(A)
Ligand
ACE-VAL-Z3E-LEU-ECQ-KCQ
ACE
-
Acetyl group
Formula:
C
2
H
4
O
Z3E
-
O-Benzyl-L-Threonine
Formula:
C
11
H
15
NO
3
ECQ
-
(3s)-3-[(2s)-2-Amino-3-Hydroxybutyl]pyrrolidin-2-One
Formula:
C
8
H
16
N
2
O
2
KCQ
-
(3s)-3-[(2s)-2-Amino-3-Oxobutyl]pyrrolidin-2-One
Formula:
C
8
H
14
N
2
O
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ACE 307(B)
3
-
-
-
Residue too small to validate
VAL 308(B)
8
8
1
1
Complete
Chiral checks - OK
Z3E 309(B)
15
15
1
1
Complete
Chiral checks - OK
LEU 310(B)
9
9
1
1
Complete
Chiral checks - OK
ECQ 311(B)
12
12
0
0
Complete
Chiral checks - OK
KCQ 311(B)
12
-
-
-
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
ACE 307(B)
-
0
VAL 308(B)
-
0
Z3E 309(B)
-
0
LEU 310(B)
O: OXT
1
ECQ 311(B)
-
0
KCQ 311(B)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand ACE-VAL-Z3E-LEU-ECQ-KCQ
List of
interactions
ACE 307(B) to KCQ 311(B)
