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PDBsum entry 2yd9
Go to PDB code:
Ligand/metal interactions
PDB id
2yd9
2 instances of ligand highlighted
NAG
Ligands
NAG
×2
NAG 1323(A)
NAG 1324(A)
B3P
B3P 1325(A)
Metals
_CL
×4
CL 1315(A)
CL 1316(A)
CL 1317(A)
CL 1318(A)
IOD
×4
IOD 1319(A)
IOD 1320(A)
IOD 1321(A)
IOD 1322(A)
Ligand
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1323(A)
15
15
1
1
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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of interactions involving ligand NAG
List of
interactions
NAG 1323(A)
_CL
×4
