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PDBsum entry 2wmi
Go to PDB code:
Ligand/metal interactions
PDB id
2wmi
2 instances of ligand highlighted
GAL-FUC-A2G
Ligands
GAL-FUC-A2G
×2
GAL 1(C) to A2G 3(C)
Ligand
GAL-FUC-A2G
GAL
-
Beta-D-Galactopyranose [Beta-D-Galactose; d-Galactose; galactose]
Formula:
C
6
H
12
O
6
FUC
-
Alpha-L-Fucopyranose [Alpha-L-Fucose; 6-Deoxy-Alpha-L-Galactopyranose; l- Fucose; fucose]
Formula:
C
6
H
12
O
5
A2G
-
2-Acetamido-2-Deoxy-Alpha-D-Galactopyranose [N-Acetyl-Alpha-D-Galactosamine; 2-Acetamido-2-Deoxy- Alpha-D-Galactose; 2-Acetamido-2-Deoxy-D-Galactose; 2- Acetamido-2-Deoxy-Galactose; n-Acetyl-2-Deoxy-2-Amino- Galactose]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GAL 1(C)
12
12
0
0
Complete
Chiral checks - OK
FUC 2(C)
11
11
1
0
Complete
Chiral checks - OK
A2G 3(C)
15
15
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GAL-FUC-A2G
List of
interactions
GAL 1(C) to A2G 3(C)
(also representing equivalent ligand GAL 1(D) to A2G 3(D) )
