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PDBsum entry 2rdl
Go to PDB code:
Ligand/metal interactions
PDB id
2rdl
2 instances of ligand highlighted
MSU-ALA-ALA-PRO-
ALV-0QE
Ligands
MSU-ALA-ALA-PRO-
ALV-0QE
×2
MSU 1(I) to 0QE 6(I)
SO4
×4
SO4 246(A)
SO4 247(A)
Ligand
MSU-ALA-ALA-PRO-ALV-0QE
MSU
-
Succinic acid monomethyl ester
Formula:
C
5
H
84
O
4
ALV
-
(2s)-2-Aminopropane-1,1-Diol
Formula:
C
3
H
9
NO
2
0QE
-
Chloromethane [Chloro methyl group]
Formula:
CH
3
Cl
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
MSU 1(I)
9
9
1
1
Complete
Chiral checks - OK
ALA 2(I)
6
-
-
-
Residue too small to validate
ALA 3(I)
6
-
-
-
Residue too small to validate
PRO 4(I)
8
8
1
1
Complete
Chiral checks - OK
ALV 5(I)
6
-
-
-
Residue too small to validate
0QE 6(I)
2
-
-
-
Residue too small to validate
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand MSU-ALA-ALA-PRO-ALV-0QE
List of
interactions
MSU 1(I) to 0QE 6(I)
(also representing equivalent ligand MSU 1(J) to 0QE 6(J) )
