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PDBsum entry 2qyf
Go to PDB code:
Ligand/metal interactions
PDB id
2qyf
Ligand highlighted
SER-TRP-TYR-SER-
TYR-PRO-PRO-PRO-
GLN-ARG
Ligands
SER-TRP-TYR-SER-
TYR-PRO-PRO-PRO-
GLN-ARG
SER 1(F) to ARG 10(F)
Ligand
SER-TRP-TYR-SER-TYR-PRO-PRO-PRO-GLN-ARG
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
SER 1(F)
7
6
0
0
1
0
-
-
-
-
TRP 2(F)
15
15
1
1
0
0
0
0
0
0
TYR 3(F)
13
13
1
1
0
0
0
0
0
0
SER 4(F)
7
6
0
0
1
0
-
-
-
-
TYR 5(F)
13
13
1
1
0
0
0
0
0
0
PRO 6(F)
8
8
1
1
0
0
0
0
0
0
PRO 7(F)
8
8
1
1
0
0
0
0
0
0
PRO 8(F)
8
8
1
1
0
0
0
0
0
0
GLN 9(F)
10
10
1
1
0
0
0
0
0
0
ARG 10(F)
12
11
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
SER 1(F)
CB: C
|
C: CB
|
O: OG
|
OG: OXT
4
TRP 2(F)
O: OXT
1
TYR 3(F)
O: OXT
1
SER 4(F)
CB: C
|
C: CB
|
O: OG
|
OG: OXT
4
TYR 5(F)
-
0
PRO 6(F)
-
0
PRO 7(F)
-
0
PRO 8(F)
-
0
GLN 9(F)
-
0
ARG 10(F)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand SER-TRP-TYR-SER-TYR-PRO-PRO-PRO-GLN-ARG
List of
interactions
SER 1(F) to ARG 10(F)
