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PDBsum entry 2qt5
Go to PDB code:
Ligand/metal interactions
PDB id
2qt5
2 instances of ligand highlighted
GLY-THR-GLU-VAL
Ligands
GLY-THR-GLU-VAL
×2
GLY 1006(X) to VAL 1009(X)
EDO
×2
EDO 1(A)
ACY
×2
ACY 244(A)
ACY 2(A)
Ligand
GLY-THR-GLU-VAL
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLY 1006(X)
5
-
-
-
Residue too small to validate
THR 1007(X)
8
8
1
1
Complete
Chiral checks - OK
GLU 1008(X)
10
10
1
1
Complete
Chiral checks - OK
VAL 1009(X)
8
8
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GLY 1006(X)
-
0
THR 1007(X)
-
0
GLU 1008(X)
OE2: OE1
|
OE1: OE2
2
VAL 1009(X)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GLY-THR-GLU-VAL
List of
interactions
GLY 1006(X) to VAL 1009(X)
(also representing equivalent ligand GLY 2006(Y) to VAL 2009(Y) )
