PDBsum entry 2k1c

Ligand/metal interactions

PDB id

2k1c


	Ligand highlighted
	ILE-THR-PHE-L2A- TYR-TYR-GLY-LYS- LYS-LYS

Ligands

ILE-THR-PHE-L2A-
TYR-TYR-GLY-LYS-
LYS-LYS

ILE 1(B) to LYS 14(B)

Ligand ILE-THR-PHE-L2A-TYR-TYR-GLY-LYS-LYS-LYS - (2s,5s,8s,11s,15e,20s)-20-Amino-2-(Carboxymethyl)-11, 20-
Dimethyl-5,8-Bis(2-Methylpropyl)-3,6,9,21-Tetraoxo-
1,4,7,10-Tetraazacyclohenicos-15-Ene-11-Carboxylic acid
Formula: C₃₀H₅₁N₅O₈

Validation of ligand annotation

Per Residue Validation

	Atoms				Missing		Incorrect Chiral Centres
Residue	Dic.	Struc.	Link	Subs.	Atoms	Rings	Planar	High	C	Other
ILE 1(B)	9	-	-	-	-	-	-	-	-	-
THR 2(B)	8	-	-	-	-	-	-	-	-	-
PHE 3(B)	12	-	-	-	-	-	-	-	-	-
L2A 4(B)	43	43	1	1	0	0	0	0	0	0
TYR 9(B)	13	-	-	-	-	-	-	-	-	-
TYR 10(B)	13	-	-	-	-	-	-	-	-	-
GLY 11(B)	5	-	-	-	-	-	-	-	-	-
LYS 12(B)	10	-	-	-	-	-	-	-	-	-
LYS 13(B)	10	-	-	-	-	-	-	-	-	-
LYS 14(B)	10	-	-	-	-	-	-	-	-	-

Advanced Analysis

Residue	Name Mismatches	Count
ILE 1(B)	-	0
THR 2(B)	-	0
PHE 3(B)	-	0
L2A 4(B)	O3: O2\|O2: O3\|O6: OXT	3
TYR 9(B)	-	0
TYR 10(B)	-	0
GLY 11(B)	-	0
LYS 12(B)	-	0
LYS 13(B)	-	0
LYS 14(B)	-	0

Additional Information

Obsolete entries are not available in the Validator^DB.
Validation carried out using MotiveValidator.

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LIGPLOT of interactions involving ligand ILE-THR-PHE-L2A-TYR-TYR-GLY-LYS-LYS-LYS

List of
interactions

ILE 1(B) to LYS 14(B)