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PDBsum entry 2ffd
Go to PDB code:
Ligand/metal interactions
PDB id
2ffd
4 instances of ligand highlighted
GLY-PRO-ARG-VAL
Ligands
GLY-PRO-ARG-VAL
×4
GLY 1(G) to VAL 4(G)
GLY 1(H) to VAL 4(H)
NAG-NAG-FUC
×2
NAG 1(K) to FUC 3(K)
Metals
_CA
×4
CA 600(B)
CA 601(C)
Ligand
GLY-PRO-ARG-VAL
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLY 1(G)
5
-
-
-
-
-
-
-
-
-
PRO 2(G)
8
8
1
1
0
0
0
0
0
0
ARG 3(G)
12
12
1
1
0
0
0
0
0
0
VAL 4(G)
8
7
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
GLY 1(G)
-
0
PRO 2(G)
-
0
ARG 3(G)
-
0
VAL 4(G)
O: OXT
1
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
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3D Viewers:
LIGPLOT
of interactions involving ligand GLY-PRO-ARG-VAL
List of
interactions
GLY 1(G) to VAL 4(G)
(also representing equivalent ligand GLY 1(I) to VAL 4(I) )
_CA
×4
