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PDBsum entry 2ayl
Go to PDB code:
Ligand/metal interactions
PDB id
2ayl
2 instances of ligand highlighted
NAG-NAG
Ligands
NAG-NAG
×2
NAG 1(C) to NAG 2(C)
NAG 1(F) to NAG 2(F)
NAG-NAG-MAN-MAN-
MAN
×2
NAG 1(D) to MAN 5(D)
NAG 1(G) to MAN 5(G)
NAG-NAG-MAN-MAN
×2
NAG 1(E) to MAN 4(E)
NAG 1(H) to MAN 4(H)
BOG
×7
BOG 751(A)
BOG 752(A)
BOG 753(A)
BOG 754(A)
BOG 1751(B)
BOG 1750(B)
BOG 1753(B)
FLP
×2
FLP 1701(A)
FLP 2701(B)
MNH
×2
MNH 601(A)
MNH 1601(B)
GOL
×5
GOL 758(A)
GOL 759(A)
GOL 760(A)
GOL 1759(B)
GOL 1760(B)
Ligand
NAG-NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(C)
15
15
1
1
0
0
0
0
0
0
NAG 2(C)
15
15
1
0
0
0
0
0
1
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG
List of
interactions
NAG 1(C) to NAG 2(C)
