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PDBsum entry 1xxv
Go to PDB code:
Ligand/metal interactions
PDB id
1xxv
2 instances of ligand highlighted
ASP-GLU-FTY-LEU-
NH2
Ligands
ASP-GLU-FTY-LEU-
NH2
×2
ASP 103(C) to NH2 107(C)
ASP-ALA-ASP-GLU-
FTY-LEU-NH2
×2
ASP 1(D) to NH2 7(D)
Ligand
ASP-GLU-FTY-LEU-NH2
FTY
-
Deoxy-Difluoromethelene-Phosphotyrosine
Formula:
C
10
H
12
F
2
NO
5
P
NH2
-
Amino group
Formula:
HnN
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ASP 103(C)
9
9
1
1
Complete
Chiral checks - OK
GLU 104(C)
10
10
1
1
Complete
Chiral checks - OK
FTY 105(C)
19
19
1
1
Complete
Chiral checks - OK
LEU 106(C)
9
9
1
1
Complete
Chiral checks - OK
NH2 107(C)
1
-
-
-
Residue too small to validate
Advanced Analysis
Residue
Name Mismatches
Count
ASP 103(C)
O: OXT
1
GLU 104(C)
OE2: OE1
|
OE1: OE2
|
O: OXT
3
FTY 105(C)
O: OXT
|
O3P: O1P
|
O1P: O3P
3
LEU 106(C)
-
0
NH2 107(C)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand ASP-GLU-FTY-LEU-NH2
List of
interactions
ASP 103(C) to NH2 107(C)
(also representing equivalent ligand ASP 103(E) to NH2 107(E) )
