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PDBsum entry 1vzq
Go to PDB code:
Ligand/metal interactions
PDB id
1vzq
Ligand highlighted
ASP-PHE-GLU-GLU-
ILE-PRO-GLU
Ligands
ASP-PHE-GLU-GLU-
ILE-PRO-GLU
ASP 1(I) to GLU 7(I)
SHY
SHY 1256(H)
Metals
_CA
CA 1258(H)
_NA
NA 1257(H)
Ligand
ASP-PHE-GLU-GLU-ILE-PRO-GLU
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ASP 1(I)
9
9
1
1
0
0
0
0
0
0
PHE 2(I)
12
12
1
1
0
0
0
0
0
0
GLU 3(I)
10
10
1
1
0
0
0
0
0
0
GLU 4(I)
10
10
1
1
0
0
0
0
0
0
ILE 5(I)
9
9
1
1
0
0
0
0
0
0
PRO 6(I)
8
8
1
1
0
0
0
0
0
0
GLU 7(I)
10
4
3
1
6
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
ASP 1(I)
OD2: OD1
|
OD1: OD2
2
PHE 2(I)
O: OXT
1
GLU 3(I)
OE2: OE1
|
OE1: OE2
2
GLU 4(I)
OE2: OE1
|
OE1: OE2
2
ILE 5(I)
O: OXT
1
PRO 6(I)
-
0
GLU 7(I)
-
0
Additional Information
Validation carried out using
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3D Viewers:
LIGPLOT
of interactions involving ligand ASP-PHE-GLU-GLU-ILE-PRO-GLU
List of
interactions
ASP 1(I) to GLU 7(I)
_CA
_NA
