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PDBsum entry 1vj7
Go to PDB code:
Ligand/metal interactions
PDB id
1vj7
2 instances of ligand highlighted
GDP
Ligands
GDP
×2
GDP 998(A)
GDP 1998(B)
GPX
GPX 1999(B)
Metals
_MN
×2
MN 997(A)
MN 1997(B)
Ligand
GDP
-
Guanosine-5'-Diphosphate
Formula:
C
10
H
15
N
5
O
11
P
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GDP 998(A)
28
28
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GDP 998(A)
O2B: O1B
|
O1B: O2B
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand corresponds to this enzyme's product GDP
LIGPLOT
of interactions involving ligand GDP
List of
interactions
GDP 998(A)
_MN
×2
