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PDBsum entry 1rid
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Ligand/metal interactions PDB id
1rid
2 instances of ligand highlighted
IDS-SGN-IDS-SGN-
IDS-SGN-IDS-SGN
Ligands
IDS-SGN-IDS-SGN-
IDS-SGN-IDS-SGN ×2
IDS 245(A) to SGN 252(A)
  
Ligand IDS-SGN-IDS-SGN-IDS-SGN-IDS-SGN

IDS - 2-O-Sulfo-Alpha-L-Idopyranuronic acid [O2-Sulfo-Glucuronic acid] Formula: C6HOO10S
SGN - N,O6-Disulfo-Glucosamine Formula: C6H13NO11S2
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
IDS 245(A) 17 Degenerate residue
SGN 246(A) 20 20 1 0 0 0 0 0 0 0
IDS 247(A) 17 17 1 0 0 0 0 0 0 0
SGN 248(A) 20 20 1 0 0 0 0 0 0 0
IDS 249(A) 17 17 1 0 0 0 0 0 0 0
SGN 250(A) 20 20 1 0 0 0 0 0 0 0
IDS 251(A) 17 17 1 0 0 0 0 0 0 0
SGN 252(A) 20 20 1 0 0 0 0 0 0 0
Advanced Analysis
Residue Name Mismatches Count
IDS 245(A) - 0
SGN 246(A) N: N2|O6S: O5S|O5S: O6S 3
IDS 247(A) O61: O6A|O62: O6B|O3S: O1S|O2S: O3S 4
SGN 248(A) N: N2|O3S: O1S|O1S: O3S|O6S: O5S|O5S: O6S 5
IDS 249(A) O61: O6A|O62: O6B|O3S: O2S|O1S: O3S 4
SGN 250(A) N: N2|O3S: O1S|O1S: O3S 3
IDS 251(A) O62: O6A|O61: O6B|O3S: O1S|O1S: O3S 4
SGN 252(A) N: N2|O3S: O2S|O2S: O3S 3
Additional Information
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  JSmol

LIGPLOT of interactions involving ligand IDS-SGN-IDS-SGN-IDS-SGN-IDS-SGN

JSmol




List of
interactions
 

IDS 245(A) to SGN 252(A)

(also representing equivalent ligand IDS 245(B) to SGN 252(B) )
  
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