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PDBsum entry 1oyt
Go to PDB code:
Ligand/metal interactions
PDB id
1oyt
Ligand highlighted
SIN-PHE-GLU-GLU-
ILE-PRO
Ligands
SIN-PHE-GLU-GLU-
ILE-PRO
SIN 1(I) to PRO 6(I)
FSN
FSN 501(H)
Metals
_NA
NA 601(H)
_CA
CA 701(H)
Ligand
SIN-PHE-GLU-GLU-ILE-PRO
-
Succinic acid
Formula:
C
4
H
6
O
4
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
SIN 1(I)
8
8
1
1
0
0
0
0
0
0
PHE 2(I)
12
12
1
1
0
0
0
0
0
0
GLU 3(I)
10
10
1
1
0
0
0
0
0
0
GLU 4(I)
10
10
1
1
0
0
0
0
0
0
ILE 5(I)
9
9
1
1
0
0
0
0
0
0
PRO 6(I)
8
7
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
SIN 1(I)
O4: O1
|
O3: O2
|
O1: O4
3
PHE 2(I)
O: OXT
1
GLU 3(I)
OE2: OE1
|
OE1: OE2
2
GLU 4(I)
OE2: OE1
|
OE1: OE2
2
ILE 5(I)
O: OXT
1
PRO 6(I)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand SIN-PHE-GLU-GLU-ILE-PRO
List of
interactions
SIN 1(I) to PRO 6(I)
_NA
_CA
