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PDBsum entry 1ng1
Go to PDB code:
Ligand/metal interactions
PDB id
1ng1
Ligand highlighted
GDP
Ligands
GDP
GDP 900(A)
EDO
×3
EDO 970(A)
EDO 971(A)
EDO 972(A)
ACY
×4
ACY 950(A)
ACY 951(A)
ACY 952(A)
ACY 953(A)
Metals
_CD
×3
CD 701(A)
CD 751(A)
CD 752(A)
_MG
×2
MG 902(A)
MG 912(A)
Ligand
GDP
-
Guanosine-5'-Diphosphate
Formula:
C
10
H
15
N
5
O
11
P
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GDP 900(A)
28
28
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GDP 900(A)
O2B: O1B
|
O1B: O2B
|
O2A: O1A
|
O1A: O2A
4
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand corresponds to this enzyme's product GDP
LIGPLOT
of interactions involving ligand GDP
List of
interactions
GDP 900(A)
_CD
×3
_MG
×2
