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PDBsum entry 1mhc
Go to PDB code:
Ligand/metal interactions
PDB id
1mhc
2 instances of ligand highlighted
FME-TYR-PHE-ILE-
ASN-ILE-LEU-THR-
LEU
Ligands
FME-TYR-PHE-ILE-
ASN-ILE-LEU-THR-
LEU
×2
FME 1(C) to LEU 9(C)
NAG
NAG 500(D)
Ligand
FME-TYR-PHE-ILE-ASN-ILE-LEU-THR-LEU
-
N-Formylmethionine
Formula:
C
6
H
11
NO
3
S
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
FME 1(C)
11
11
1
1
Complete
Chiral checks - OK
TYR 2(C)
13
13
1
1
Complete
Chiral checks - OK
PHE 3(C)
12
12
1
1
Complete
Chiral checks - OK
ILE 4(C)
9
9
1
1
Complete
Chiral checks - OK
ASN 5(C)
9
9
1
1
Complete
Chiral checks - OK
ILE 6(C)
9
9
1
1
Complete
Chiral checks - OK
LEU 7(C)
9
9
1
1
Complete
Chiral checks - OK
THR 8(C)
8
8
1
1
Complete
Chiral checks - OK
LEU 9(C)
9
9
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
FME 1(C)
O: OXT
1
TYR 2(C)
-
0
PHE 3(C)
-
0
ILE 4(C)
-
0
ASN 5(C)
O: OXT
1
ILE 6(C)
-
0
LEU 7(C)
O: OXT
1
THR 8(C)
O: OXT
1
LEU 9(C)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand FME-TYR-PHE-ILE-ASN-ILE-LEU-THR-LEU
List of
interactions
FME 1(C) to LEU 9(C)
(also representing equivalent ligand FME 1(F) to LEU 9(F) )
