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PDBsum entry 1l6o
Go to PDB code:
Ligand/metal interactions
PDB id
1l6o
3 instances of ligand highlighted
SER-LEU-LYS-LEU-
MET-THR-THR-VAL
Ligands
SER-LEU-LYS-LEU-
MET-THR-THR-VAL
×3
SER 1(D) to VAL 8(D)
Ligand
SER-LEU-LYS-LEU-MET-THR-THR-VAL
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
SER 1(D)
7
6
0
0
1
0
-
-
-
-
LEU 2(D)
9
9
1
1
0
0
0
0
0
0
LYS 3(D)
10
10
1
1
0
0
0
0
0
0
LEU 4(D)
9
9
1
1
0
0
0
0
0
0
MET 5(D)
9
9
1
1
0
0
0
0
0
0
THR 6(D)
8
8
1
1
0
0
0
0
0
0
THR 7(D)
8
8
1
1
0
0
0
0
0
0
VAL 8(D)
8
8
0
0
0
0
0
0
0
0
Advanced Analysis
Residue
Name Mismatches
Count
SER 1(D)
CB: C
|
C: CB
|
O: OG
|
OG: OXT
4
LEU 2(D)
O: OXT
1
LYS 3(D)
-
0
LEU 4(D)
O: OXT
1
MET 5(D)
-
0
THR 6(D)
-
0
THR 7(D)
-
0
VAL 8(D)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand SER-LEU-LYS-LEU-MET-THR-THR-VAL
List of
interactions
SER 1(D) to VAL 8(D)
also representing 2 other equivalent ligands:
SER 1(E) to VAL 8(E)
SER 1(F) to VAL 8(F)
