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PDBsum entry 1dp6
Go to PDB code:
Ligand/metal interactions
PDB id
1dp6
Ligand highlighted
OXY-HEM
Ligands
OXY-HEM
OXY 500(A) to HEM 719(A)
Ligand
OXY-HEM
OXY
-
Oxygen molecule
Formula:
O
2
HEM
-
Protoporphyrin IX containing fe [Heme]
Formula:
C
34
H
32
FeN
4
O
4
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
OXY 500(A)
2
-
-
-
Residue too small to validate
HEM 719(A)
43
43
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
OXY 500(A)
-
0
HEM 719(A)
O2A: O1A
|
O1A: O2A
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand OXY-HEM
List of
interactions
OXY 500(A) to HEM 719(A)
