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PDBsum entry 1dfl
Go to PDB code:
Ligand/metal interactions
PDB id
1dfl
2 instances of ligand highlighted
VO4-ADP
Ligands
VO4-ADP
×2
VO4 1998(A) to ADP 1999(A)
Metals
_MG
×4
MG 1996(Y)
MG 1997(A)
_CA
×2
CA 1995(Z)
Ligand
VO4-ADP
VO4
-
Vanadate ion
Formula:
O
4
V
3
ADP
-
Adenosine-5'-Diphosphate
Formula:
C
10
H
15
N
5
O
10
P
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
VO4 1998(A)
5
-
-
-
-
-
-
-
-
-
ADP 1999(A)
27
27
0
0
0
0
0
1
0
0
Advanced Analysis
Residue
Name Mismatches
Count
VO4 1998(A)
-
0
ADP 1999(A)
O2A: O1A
|
O1A: O2A
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand VO4-ADP
List of
interactions
VO4 1998(A) to ADP 1999(A)
(also representing equivalent ligand VO4 2998(B) to ADP 2999(B) )
_MG
×4
_CA
×2
