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PDBsum entry 1bk6
Go to PDB code:
Ligand/metal interactions
PDB id
1bk6
2 instances of ligand highlighted
LYS-LYS-LYS-ARG-
LYS-VAL
Ligands
LYS-LYS-LYS-ARG-
LYS-VAL
×2
LYS 127(C) to VAL 132(C)
ALA-LYS-LYS-ALA-
ALA
×2
ALA 127(D) to ALA 131(D)
Ligand
LYS-LYS-LYS-ARG-LYS-VAL
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
LYS 127(C)
10
10
1
1
0
0
0
0
0
0
LYS 128(C)
10
10
1
1
0
0
0
0
0
0
LYS 129(C)
10
10
1
1
0
0
0
0
0
0
ARG 130(C)
12
12
1
1
0
0
0
0
0
0
LYS 131(C)
10
10
1
1
0
0
0
0
0
0
VAL 132(C)
8
7
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
LYS 127(C)
-
0
LYS 128(C)
-
0
LYS 129(C)
O: OXT
1
ARG 130(C)
-
0
LYS 131(C)
-
0
VAL 132(C)
O: OXT
1
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand LYS-LYS-LYS-ARG-LYS-VAL
List of
interactions
LYS 127(C) to VAL 132(C)
(also representing equivalent ligand LYS 127(E) to VAL 132(E) )
