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Journal and figure statistics

The table below shows the numbers of journal articles that are cited in the header records of PDB files. It also shows the counts of articles from which figures have been taken (with permission from the publishers) and used to illustrate the corresponding entries in PDBsum (for examples, see the Gallery). Note that only those references which have been matched to a PubMed identifier are included.

        Figures extracted for PDBsum
    Number Number of PDB entries Number Number of PDB entries
Top   of papers that cite these papers of papers that cite these papers
20 Journal cited Key refs Sec refs Add refs used Key refs Sec refs Add refs
1. J Mol Biol 6162 10307 6326 1 4203 7532 3125 1
2. J Biol Chem 5480 9305 3319 3 3240 5774 1180 3
3. Biochemistry 4760 8766 4395
4. Proc Natl Acad Sci U S A 3157 5809 2135 1606 2978 606
5. Acta Crystallogr D Biol Crystallogr 2443 3404 1997 96 1747 2079 1737 92
6. Structure 2086 4057 1104 1 1521 2718 1004 1
7. Nature 1548 2575 2335 635 1183 503
8. Proteins 1326 1965 601 794 1253 177
9. Protein Sci 1297 2158 803 1 690 1124 343 1
10. EMBO J 1149 1945 665 689 1164 265
11. J Med Chem 1100 2790 397
12. Nat Struct Biol 1011 1623 836 653 1128 286
13. Science 975 1637 1737 460 806 325
14. Bioorg Med Chem Lett 903 1509 118
15. Nucleic Acids Res 796 1321 258 31 45 42
16. Acta Crystallogr Sect F Struct Biol Cryst Commun 786 716 504 122 87 91
17. Cell 710 1364 527 480 851 347
18. J Am Chem Soc 704 1464 121
19. FEBS Lett 698 612 635 298 249 235
20. Mol Cell 609 1180 93 473 871 91
  others ... 12336 19748 6035 4 934 1567 398
  TOTALS 50036 84255 34941 106 18576 31409 10755 98

The reference are classified as follows:

  • key reference - cited in the JRNL records in the corresponding PDB file,
  • secondary reference - listed in the REMARK records of the corresponding PDB file, or
  • added reference - either suggested by the author(s) or obtained from the journal in question (eg Acta Cryst D lists related PDB codes on its contents pages).

Other statistics

Numbers of "key" references given in PDB files
PDB entries with a key reference having a PubMed id 84255
PDB entries whose key reference cannot be matched to a PubMed id 20112
PDB entries that do not cite a key reference 1646
TOTAL number of PDB entries 106023
 
Corresponding author e-mail addresses
Papers with valid e-mail addresses 17924
Papers with invalid e-mail addresses 2367
Papers with no e-mail address given 2079
TOTAL number of papers 18576
 
Author input
Papers whose figures have been reviewed by their authors 3435
Papers that have been annotated by Author's Comments 243
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