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Structural Information for 2gmh

The following displays the crystal structure (as found in 2gmh, the primary PDB code for the entry) with each catalytic domain highlighted. The catalytic residues are also highlighed in teal and shown in wireframe depiction. Domains which are not classified as catalytic are shown in grey.


The Catalytic Domains:

  • There are 7 catalytic residues within an unassigned CATH domain: Arg331A, Thr367A, Ser82A, Cys553A, Cys559A, Cys556A, Cys527A

The Catalytic Residues

The following shows the catalytic residues (the catalytic residue in focus is labelled in red) and the residues which are donating hydrogen bonds (labelled in blue) and accepting hydrogen bonds (labelled in green).

Arg 331 A

Residues Contacting Arg331A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
53.0236
(0.793)
58.2 1 7

Thr 367 A

Residues Contacting Thr367A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
11.7228
(0.0862)
0.1 2 1

Ser 82 A

Residues Contacting Ser82A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
9.48
(0.5247)
23 3 2

Cys 553 A

Residues Contacting Cys553A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
26.0883
(0.1596)
7.4 2 2

Cys 559 A

Residues Contacting Cys559A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
20.5883
(0.0327)
7.4 1 1

Cys 556 A

Residues Contacting Cys556A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
20.6816
(0.0336)
6.9 3 1

Cys 527 A

This residue does not appear to have any contacts to other species in the PDB file.

.
B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
20.35
(0.6672)
0.1 0 0

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